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-I/pbulk/work/biology/sra-tools/work/sra-tools-3.2.0/ngs/ngs-sdk -I/pbulk/work/biology/sra-tools/work/sra-tools-3.2.0/libs/inc -I/pbulk/work/biology/sra-tools/work/sra-tools-3.2.0/ngs/ncbi/ngs-py -Wall -O2 -I/usr/pkg/include -I/usr/include -I/usr/pkg/include/python3.12 -I/usr/pkg/include/libxml2 -Wno-unused-function -g -std=c++17 -fPIC -MD -MT ngs/ngs-sdk/language/python/CMakeFiles/ngs-bind-python.dir/py_AlignmentItf.cpp.o -MF CMakeFiles/ngs-bind-python.dir/py_AlignmentItf.cpp.o.d -o CMakeFiles/ngs-bind-python.dir/py_AlignmentItf.cpp.o -c /pbulk/work/biology/sra-tools/work/sra-tools-3.2.0/ngs/ngs-sdk/language/python/py_AlignmentItf.cpp --- shared/CMakeFiles/tk-version.dir/all --- --- ilib/libtk-version.a --- [ 1%] Linking C static library ../ilib/libtk-version.a cd /pbulk/work/biology/sra-tools/work/sra-tools-3.2.0/cmake-pkgsrc-build/shared && /usr/pkg/bin/cmake -P CMakeFiles/tk-version.dir/cmake_clean_target.cmake --- libs/kxml/CMakeFiles/kxml.dir/all --- /pbulk/work/biology/sra-tools/work/sra-tools-3.2.0/libs/kxml/xml.c:174:52: error: expected ';', ',' or ')' before 'ATTRIBUTE_UNUSED' 174 | static void s_xmlGenericErrorDefaultFunc(void *ctx ATTRIBUTE_UNUSED, | ^~~~~~~~~~~~~~~~ /pbulk/work/biology/sra-tools/work/sra-tools-3.2.0/libs/kxml/xml.c: In function 'KXMLMgrMakeDocReadFromMemory': /pbulk/work/biology/sra-tools/work/sra-tools-3.2.0/libs/kxml/xml.c:266:35: error: 's_xmlGenericErrorDefaultFunc' undeclared (first use in this function); did you mean 'initGenericErrorDefaultFunc'? 266 | { xmlSetGenericErrorFunc(0, s_xmlGenericErrorDefaultFunc); } | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ | initGenericErrorDefaultFunc /pbulk/work/biology/sra-tools/work/sra-tools-3.2.0/libs/kxml/xml.c:266:35: note: each undeclared identifier is reported only once for each function it appears in --- shared/CMakeFiles/tk-version.dir/all --- cd /pbulk/work/biology/sra-tools/work/sra-tools-3.2.0/cmake-pkgsrc-build/shared && /usr/pkg/bin/cmake -E cmake_link_script 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[ngs/ngs-sdk/language/python/CMakeFiles/ngs-bind-python.dir/all] Error code 6 make[1]: stopped in /pbulk/work/biology/sra-tools/work/sra-tools-3.2.0/cmake-pkgsrc-build --- ngs/ngs-sdk/adapter/CMakeFiles/ngs-adapt-c++.dir/all --- *** [ngs/ngs-sdk/adapter/CMakeFiles/ngs-adapt-c++.dir/all] Error code 6 make[1]: stopped in /pbulk/work/biology/sra-tools/work/sra-tools-3.2.0/cmake-pkgsrc-build --- libs/kxml/CMakeFiles/kxml.dir/all --- *** [libs/kxml/CMakeFiles/kxml.dir/all] Error code 2 make[1]: stopped in /pbulk/work/biology/sra-tools/work/sra-tools-3.2.0/cmake-pkgsrc-build --- ngs/ngs-sdk/dispatch/CMakeFiles/ngs-disp.dir/all --- *** [ngs/ngs-sdk/dispatch/CMakeFiles/ngs-disp.dir/all] Error code 6 make[1]: stopped in /pbulk/work/biology/sra-tools/work/sra-tools-3.2.0/cmake-pkgsrc-build --- ngs/ncbi/ngs/CMakeFiles/ngs.dir/all --- *** [ngs/ncbi/ngs/CMakeFiles/ngs.dir/all] Error code 6 make[1]: stopped in /pbulk/work/biology/sra-tools/work/sra-tools-3.2.0/cmake-pkgsrc-build --- shared/CMakeFiles/tk-version.dir/all --- [ 1%] Built target tk-version --- ngs/ngs-sdk/language/c++/CMakeFiles/ngs-bind-c++.dir/all --- *** [ngs/ngs-sdk/language/c++/CMakeFiles/ngs-bind-c++.dir/all] Error code 6 make[1]: stopped in /pbulk/work/biology/sra-tools/work/sra-tools-3.2.0/cmake-pkgsrc-build --- ngs/ncbi/ngs-py/CMakeFiles/ngs-py.dir/all --- *** [ngs/ncbi/ngs-py/CMakeFiles/ngs-py.dir/all] Error code 6 make[1]: stopped in /pbulk/work/biology/sra-tools/work/sra-tools-3.2.0/cmake-pkgsrc-build 7 errors make[1]: stopped in /pbulk/work/biology/sra-tools/work/sra-tools-3.2.0/cmake-pkgsrc-build *** [all] Error code 2 make: stopped in /pbulk/work/biology/sra-tools/work/sra-tools-3.2.0/cmake-pkgsrc-build 1 error make: stopped in /pbulk/work/biology/sra-tools/work/sra-tools-3.2.0/cmake-pkgsrc-build *** Error code 2 Stop. make[1]: stopped in /usr/pkgsrc/biology/sra-tools *** Error code 1 Stop. make: stopped in /usr/pkgsrc/biology/sra-tools