=> Bootstrap dependency digest>=20211023: found digest-20220214
===> Skipping vulnerability checks.
WARNING: No /usr/pkg/pkgdb/pkg-vulnerabilities file found.
WARNING: To fix run: `/usr/sbin/pkg_admin -K /usr/pkg/pkgdb fetch-pkg-vulnerabilities'.
===> Installing for R-RNetCDF-2.9.2nb5
=> Generating pre-install file lists
=> Creating installation directories
* installing *source* package 'RNetCDF' ...
** package 'RNetCDF' successfully unpacked and MD5 sums checked
** using staged installation
Warning in system2(file.path(R.home("bin"), "R"), c("CMD", "config", x),  :
  running command ''/usr/pkg/lib/R/bin/R' CMD config FCFLAGS' had status 1
configure: Find compiler/linker variables from environment:
checking CFLAGS... -O2 -march=i586 -I/usr/pkg/include -I/usr/include -I/usr/pkg/include/libxml2
checking CPPFLAGS... -I/usr/pkg/include -I/usr/include -I/usr/pkg/include/libxml2
checking LDFLAGS... -Wl,-zrelro -L/usr/pkg/lib -Wl,-R/usr/pkg/lib -L/usr/lib -Wl,-R/usr/lib -lexecinfo
checking LIBS... 
configure: Select C compiler:
checking C compiler from --with-mpicc... 
checking C compiler from R... gcc
*** Error code 1

Stop.
make: stopped in /pbulk/work/math/R-RNetCDF/work/RNetCDF
configure: Find compiler/linker variables from R:
checking R_CFLAGS... -O2 -march=i586 -pthread -I/usr/pkg/include -I/usr/include -I/usr/pkg/include/glib-2.0 -I/usr/pkg/include/gio-unix-2.0 -I/usr/pkg/lib/glib-2.0/include -I/usr/X11R7/include -I/usr/pkg/include/freetype2 -I/usr/pkg/include/harfbuzz -I/usr/pkg/include/libxml2
checking R_CPPFLAGS... -I/usr/pkg/include -I/usr/include -I/usr/pkg/include/glib-2.0 -I/usr/pkg/include/gio-unix-2.0 -I/usr/pkg/lib/glib-2.0/include -I/usr/X11R7/include -I/usr/pkg/include/freetype2 -I/usr/pkg/include/harfbuzz -I/usr/pkg/include/libxml2
*** Error code 1

Stop.
make: stopped in /pbulk/work/math/R-RNetCDF/work/RNetCDF
checking R_LDFLAGS... -Wl,-R/usr/pkg/lib/R/lib -Wl,-zrelro -L/usr/pkg/lib -L/usr/lib -Wl,-R/usr/lib -Wl,-R/usr/pkg/lib -pthread -L/usr/X11R7/lib -Wl,-R/usr/X11R7/lib
*** Error code 1

Stop.
make: stopped in /pbulk/work/math/R-RNetCDF/work/RNetCDF
checking for gcc... gcc
*** Error code 1

Stop.
make: stopped in /pbulk/work/math/R-RNetCDF/work/RNetCDF
checking whether the C compiler works... no
configure: error: in `/pbulk/work/math/R-RNetCDF/work/RNetCDF':
configure: error: C compiler cannot create executables
See `config.log' for more details
configure: WARNING: cache variable ac_cv_prog_ac_ct_CC contains a newline
ERROR: configuration failed for package 'RNetCDF'
* removing '/pbulk/work/math/R-RNetCDF/work/.destdir/usr/pkg/lib/R/library/RNetCDF'
*** Error code 1

Stop.
make[1]: stopped in /usr/pkgsrc/math/R-RNetCDF
*** Error code 1

Stop.
make: stopped in /usr/pkgsrc/math/R-RNetCDF